Photosynthesis RIDES new repeat


Requires Firmware 1.22 or higher

Measures the same photosynthesis-related parameters in <15 seconds as 'Leaf Photosynthesis MutlispeQ v1.0' plus additional PS1 and P700 measurements.

  • Chlorophll Fluorescence: Phi2, PhiNPQ, PhiNO, NPQt, qL, LEF
  • Relative Chlorophyll
  • ATP synthase conductivity, proton motive force parameters through DIRK(ECS): ECSt mAU, vH+, gH+
  • Saturation pulse estimation of PSI parameters: PS1 active centers, PS1 open, PS1 oxidized and PS1 over reduced
  • Absorbance at: 450, 535, 605, 650, 730, 850, 880, and 940nm.
  • The rate of turnover of the cytochrome b6f complex through DIRKP(700)
  • Leaf Thickness (in mm), angle, and cardinal direction
  • Leaf Temperature and differential from ambient temperature
  • Environmental conditions: PAR and ambient temperature/pressure/humidity
[
  {
    "_protocol_set_": [
      {
        "label": "no_leaf_baseline",
        "open_close_start": 0,
        "energy_save_timeout": 300000,
        "energy_min_wake_time": 7000,
        "environmental": [
          [
            "light_intensity"
          ],
          [
            "temperature_humidity_pressure"
          ],
          [
            "temperature_humidity_pressure2"
          ],
          [
            "contactless_temp"
          ],
          [
            "compass_and_angle"
          ]
        ],
        "averages": 1
      },
      {
        "label": "DIRK_ECS",
        "open_close_start": 0,
        "protocols_delay": 10,
        "autogain": [
          [
            2,
            1,
            3,
            12,
            50000
          ],
          [
            3,
            8,
            1,
            80,
            50000
          ]
        ],
        "environmental": [
          [
            "light_intensity"
          ],
          [
            "temperature_humidity_pressure"
          ],
          [
            "temperature_humidity_pressure2"
          ],
          [
            "contactless_temp"
          ],
          [
            "thickness"
          ]
        ],
        "averages": 1,
        "pulse_distance": [
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500
        ],
        "pulse_length": [
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
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            "auto_duration2"
          ],
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            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ],
          [
            "auto_duration2"
          ]
        ],
        "nonpulsed_lights_brightness": [
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
          ],
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
          ],
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
          ],
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
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            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
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          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
          ],
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
          ],
          [
            "light_intensity"
          ]
        ],
        "pulsed_lights": [
          [
            1
          ],
          [
            1
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          [
            1
          ],
          [
            1
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          [
            1
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            1
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            1
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            1
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            1
          ],
          [
            3
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          [
            3
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          [
            3
          ]
        ],
        "detectors": [
          [
            3
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          [
            3
          ],
          [
            3
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          [
            3
          ],
          [
            3
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            3
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            3
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            3
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          [
            3
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          [
            3
          ],
          [
            1
          ],
          [
            1
          ],
          [
            1
          ]
        ],
        "pulsed_lights_brightness": [
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
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            "auto_bright2"
          ],
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            "auto_bright2"
          ],
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          ],
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          ],
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            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
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            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ],
          [
            "auto_bright2"
          ]
        ],
        "pulses": [
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          20,
          20,
          100
        ],
        "nonpulsed_lights": [
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
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          [
            2
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          [
            2
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            2
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            2
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            2
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            2
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            2
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            2
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          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ]
        ]
      },
      {
        "label": "DIRK_P700",
        "environmental": [
          [
            "previous_light_intensity"
          ],
          [
            "temperature_humidity_pressure"
          ],
          [
            "temperature_humidity_pressure2"
          ],
          [
            "contactless_temp"
          ],
          [
            "compass_and_angle"
          ]
        ],
        "protocols_delay": 1,
        "averages": 1,
        "pulses": [
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100,
          100,
          20,
          100
        ],
        "pulse_distance": [
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500,
          1500
        ],
        "pulse_length": [
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
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            "auto_duration3"
          ],
          [
            "auto_duration3"
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            "auto_duration3"
          ],
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            "auto_duration3"
          ],
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            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
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            "auto_duration3"
          ],
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            "auto_duration3"
          ],
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            "auto_duration3"
          ],
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            "auto_duration3"
          ],
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            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ],
          [
            "auto_duration3"
          ]
        ],
        "nonpulsed_lights_brightness": [
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
          ],
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
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          ],
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            "light_intensity"
          ],
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            0
          ],
          [
            "light_intensity"
          ],
          [
            "light_intensity"
          ],
          [
            0
          ],
          [
            "light_intensity"
          ]
        ],
        "pulsed_lights": [
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
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          [
            8
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          [
            8
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          [
            8
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          [
            8
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          [
            8
          ],
          [
            8
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          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ],
          [
            8
          ]
        ],
        "detectors": [
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            1
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          [
            1
          ],
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            1
          ],
          [
            1
          ],
          [
            1
          ],
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            1
          ],
          [
            1
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          [
            1
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          [
            1
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            1
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            1
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            1
          ],
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            1
          ],
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            1
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            1
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            1
          ],
          [
            1
          ],
          [
            1
          ],
          [
            1
          ],
          [
            1
          ],
          [
            1
          ],
          [
            1
          ]
        ],
        "pulsed_lights_brightness": [
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ],
          [
            "auto_bright3"
          ]
        ],
        "nonpulsed_lights": [
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
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            2
          ],
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            2
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            2
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            2
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            2
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            2
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            2
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            2
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            2
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            2
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            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ]
        ]
      },
      {
        "label": "PAM",
        "pulses": [
          100,
          30,
          15,
          15,
          15,
          15,
          15,
          600,
          15,
          30,
          15,
          15,
          15,
          15
        ],
        "nonpulsed_lights": [
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            9
          ],
          [
            0
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ],
          [
            2
          ]
        ],
        "nonpulsed_lights_brightness": [
          [
            "light_intensity"
          ],
          [
            8000
          ],
          [
            7000
          ],
          [
            6000
          ],
          [
            5000
          ],
          [
            4000
          ],
          [
            0
          ],
          [
            2090
          ],
          [
            0
          ],
          [
            8000
          ],
          [
            6000
          ],
          [
            4000
          ],
          [
            3000
          ],
          [
            "light_intensity"
          ]
        ],
        "pulse_distance": [
          5000,
          5000,
          5000,
          5000,
          5000,
          5000,
          5000,
          5000,
          5000,
          5000,
          5000,
          5000,
          5000
        ],
        "pulsed_lights_brightness": [
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            0
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ],
          [
            400,
            "auto_bright3"
          ]
        ],
        "pulse_length": [
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
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            0
          ],
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            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ],
          [
            30,
            "auto_duration3"
          ]
        ],
        "detectors": [
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            1,
            1
          ],
          [
            1,
            1
          ],
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            1,
            1
          ],
          [
            1,
            1
          ],
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            1,
            1
          ],
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            1,
            1
          ],
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            1,
            1
          ],
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            0
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            1,
            1
          ],
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            1,
            1
          ],
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            1,
            1
          ],
          [
            1,
            1
          ],
          [
            1,
            1
          ],
          [
            1,
            1
          ]
        ],
        "pulsed_lights": [
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            0
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ],
          [
            3,
            8
          ]
        ],
        "environmental": [
          [
            "previous_light_intensity"
          ],
          [
            "temperature_humidity_pressure"
          ],
          [
            "temperature_humidity_pressure2"
          ],
          [
            "contactless_temp"
          ],
          [
            "thickness"
          ],
          [
            "compass_and_angle"
          ]
        ],
        "averages": 1
      }
    ]
  }
]
Sam 0645   copy   copy  2
Created by

Dan TerAvest


Category

Plants
Connected Macro

Photosynthesis RIDES


Compatible Instruments

MultispeQ v1.0


Latest Update

Feb 2018