Cyanobacteria Phi2


Cyano
var data = json.data_raw;
var output = {};
var sample_cal = MathMEAN(data.slice(2,17));

var Fss = MathMEAN(data.slice(25,35));
var FmPs = MathMEAN(data.slice(50,80)); 
var fvfms = (FmPs-Fss)/FmPs;

var Fs = MathMEAN(data.slice(25,35)); // take only the first 4 values in the Fs range, excluding the very first
var FmP = MathMEAN(data.slice(50,80));  // sort the saturating light values from low to high
var Fo = MathMEAN(data.slice(100,110));
var fvfm = (FmP-Fs)/FmP;

var Fs_stdev = MathSTDEV(data.slice(25,35));
var Fm_stdev = MathSTDEV(data.slice(50,80));

output["Phi2"] = MathROUND(fvfm,3);
output["Fs"] = MathROUND(Fs,3);
output["FmPrime"] = MathROUND(FmP,3);
output["Fo"] = MathROUND(Fo,3);

// output signal quality
//output["Fs_relative_stdev"] = MathROUND(Fs_relative_stdev,4); 
//output["Fs_stdev"] = MathROUND(Fs_stdev,4);
//output["Fm_stdev"] = MathROUND(Fm_stdev,4);

return output;
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}
012409 pbi 160 low low res headshot
Created by

Greg Austic


Protocol connections:
12
Latest Update:
Feb 2015